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View Structure Prediction Details

Protein: gi|221320237
Organism: Bacillus subtilis subsp. subtilis str. JH642
Length: 463 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221320237.

Description E-value Query
Range
Subject
Range
gi|42548077, gi|... - gi|46115934|ref|XP_383985.1| hypothetical protein FG03809.1 [Gibberella zeae PH-1], gi|42548077|gb|E...
300.0 [0..2] [462..1095]

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Predicted Domain #1
Region A:
Residues: [1-463]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKQKQELHR GLEERHISLM SLGAAIGVGL FLGSASAIQL AGPGILVAYA ASGLVMFFIM  60
   61 RALGEMAIQK PVAGSFSRYA RDYLGPLAGY LTGWNYWFLW VVTCMAEITA VGIYMGFWFP 120
  121 DVPNWIWALS ALVIMTGVNF LAVKAYGELE FWFALIKIVA ILSMIAVGLL MIIAGVGNGG 180
  181 IATGISNLWN NGGFFPHGLK GVLLSLQMVM FAYLGIEMIG VTAGEVKNPQ KSLAKAIDTV 240
  241 FWRILIFYVG ALFVIMSIYP WQEIGSQGSP FVLTFQKVGI PSAAGIINFV VLTAALSSCN 300
  301 SGIFSTGRML FNLAEQKEAP QAYGQLTKGG IPGKAVLASA GALLVGVLLN YVVPAKVFTW 360
  361 VTSIATFGAI WTWAIILLSQ IKYRKSLKPE EKKQLKYKMP LFPFTSYVSL AFLAFVVILM 420
  421 AYSPDTRVAV IIGPIWFLIL LAVYYGKGFH KKNAAAASER NIS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.38
Match: 2a65A
Description: Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle