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View Structure Prediction Details

Protein: gi|190409038
Organism: Saccharomyces cerevisiae RM11-1a
Length: 172 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190409038.

Description E-value Query
Range
Subject
Range
gi|190409038 - gi|190409038|gb|EDV12303.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
YNL046W - Putative protein of unknown function; expression depends on Swi5p; GFP-fusion protein localizes to t...
YNE6_YEAST - Uncharacterized endoplasmic reticulum membrane protein YNL046W OS=Saccharomyces cerevisiae (strain A...
2.0E-97 [1..172] [1..172]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHVSKRSIG QFFKRKTSTV DGSKSQKCGT TNQLRKLLHK RRVQKQAVPV ESQYRIPGDF  60
   61 RDNQSVRVKN SMYNSSPSVT PSTHHINERY VRYDINTRPL VVVLAISIVF FGCLLVLKDI 120
  121 IIQSSENILS VSKWKIIGAS FMGTPYTGLL TGLVGPLLSP FSAVSSWLSF IF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle