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View Structure Prediction Details

Protein: gi|221319455
Organism: Bacillus subtilis subsp. subtilis str. JH642
Length: 450 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221319455.

Description E-value Query
Range
Subject
Range
gi|152975662, gi... - gi|89202333|ref|ZP_01181059.1| Propeptide, PepSY amd peptidase M4 [Bacillus cereus subsp. cytotoxis ...
521.0 [0..1] [448..1]

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Predicted Domain #1
Region A:
Residues: [1-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRGILIAVL GIAIVGTGYW GYKEHQEKDA VLLHAENNYQ RAFHELTYQV DQLHDKIGTT  60
   61 LAMNSQKSLS PALIDVWRIT SEAHNSVSQL PLTLMPFNKT EELLSKIGDF SYKTSVRDLD 120
  121 QKPLDKNEYT SLNKLYQQSE DIQNELRHVQ HLVMSKNLRW MDVEMALASD EKQSDNTIIN 180
  181 SFKTVEKNVG AFSTGTDLGP SFTSTKKEEK GFSHLK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [217-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKQISEQEAK QIAERFAPDD NYSIKVVKSG KKTNRDVYSI SMKDPDHKAV IYMDITKKGG  60
   61 HPVYLIQNRE VKDQKISLND GSNRALAFLK KNGFE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 3.920819
Match: PF03413.10
Description: No description for PF03413.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [312-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDDLEIDESA QYDKIGVFSY VPVENKVRMY PEAIRMKVAL DDGEVVGFSA RDFLTSHRKR  60
   61 T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [373-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPKPAITEAE AKSKLNKNVQ VRETRLALIT NELGQEVLCY EMLGTIENDT FRMYINAKDG  60
   61 SEEKVEKLKN AEPIYKDL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 4.0
Match: PF03413.10
Description: No description for PF03413.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle