Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|197096561, gi....
Description |
E-value |
Query Range |
Subject Range |
gi|224586208, gi... - gi|224586208|ref|YP_002640007.1| ribonuclease R [Salmonella enterica subsp. enterica serovar Paratyp...
gi|62182814, gi|... - gi|62182814|ref|YP_219231.1| exoribonuclease R [Salmonella enterica subsp. enterica serovar Cholerae...
|
0.0 |
[1..794] |
[1..794] |
gi|81243587, gi|... - gi|82779439|ref|YP_405788.1| putative enzyme [Shigella dysenteriae Sd197], gi|81243587|gb|ABB64297.1...
|
0.0 |
[1..794] |
[15..805] |
gi|49176467, gi|... - gi|49176467|ref|NP_418600.3| RNase R [Escherichia coli K12], gb|AAC77136.1| ribonuclease R; RNase R ...
gi|1361201, gi|5... - gi|537020|gb|AAA97075.1| vacB [Escherichia coli], pir||S56404 virulence-associated protein vacB homo...
gi|537020|gb|AAA... - vacB [Escherichia coli]
|
0.0 |
[1..794] |
[15..809] |
gi|238903286, gi... - gi|238903286|ref|YP_002929082.1| exoribonuclease R, RNase R [Escherichia coli BW2952], gi|238861060|...
gi|194439533, gi... - gi|83585083|ref|ZP_00923736.1| COG0557: Exoribonuclease R [Escherichia coli 101-1], gi|194439533|ref...
EG11259 - exoribonuclease R, RNase R / Exoribonuclease R, RNase R
gi|85676930, gi|... - gi|89110899|ref|AP_004679.1| exoribonuclease R, RNase R [Escherichia coli str. K-12 substr. W3110], ...
RNR_ECOLI - Ribonuclease R (EC 3.1.-.-) (RNase R) (Protein vacB) - Escherichia coli
EG11259 - exoribonuclease R, RNase R / Exoribonuclease R, RNase R
gi|169891460, gi... - gi|170083625|ref|YP_001732945.1| exoribonuclease R, RNase R [Escherichia coli str. K-12 substr. DH10...
gi|253976009, gi... - gi|254164108|ref|YP_003047216.1| exoribonuclease R, RNase R [Escherichia coli B str. REL606], gi|253...
gi|253775196, gi... - gi|254290858|ref|YP_003056606.1| exoribonuclease R, RNase R [Escherichia coli BL21(DE3)], gi|2539801...
gi|251787428, gi... - gi|251787428|ref|YP_003001732.1| hypothetical protein B21_04008 [Escherichia coli BL21], gi|24237970...
|
0.0 |
[1..794] |
[1..795] |
gi|193066029, gi... - gi|75255906|ref|ZP_00727638.1| COG0557: Exoribonuclease R [Escherichia coli E22], gi|193066029|ref|Z...
gi|75212272, gi|... - gi|75212272|ref|ZP_00712312.1| COG0557: Exoribonuclease R [Escherichia coli B171], gi|194426579|ref|...
|
0.0 |
[1..794] |
[1..795] |
gi|24054862, gi|... - gi|24115534|ref|NP_710044.1| putative enzyme [Shigella flexneri 2a str. 301], gi|24054862|gb|AAN4575...
gi|30065551, gi|... - gi|30065551|ref|NP_839722.1| putative enzyme [Shigella flexneri 2a str. 2457T], gi|30043815|gb|AAP19...
|
0.0 |
[1..794] |
[15..809] |
RNR_SHIFL - Ribonuclease R OS=Shigella flexneri GN=rnr PE=3 SV=4
gi|161485844 - gi|161485844|ref|NP_710044.2| exoribonuclease R [Shigella flexneri 2a str. 301]
gi|161486368 - gi|161486368|ref|NP_839722.2| exoribonuclease R [Shigella flexneri 2a str. 2457T]
|
0.0 |
[1..794] |
[1..795] |
gi|15804768, gi|... - gi|15804768|ref|NP_290809.1| putative enzyme [Escherichia coli O157:H7 EDL933], gi|12519167|gb|AAG59...
gi|13364632 - gi|13364632|dbj|BAB38578.1| putative enzyme [Escherichia coli O157:H7 str. Sakai]
gi|13364632 - gi|13364632|dbj|BAB38578.1| putative enzyme [Escherichia coli O157:H7]
gi|25298860, gi|... - pir||C86114 probable enzyme vacB [imported] - Escherichia coli (strain O157:H7, substrain EDL933), ...
|
0.0 |
[1..794] |
[15..809] |
gi|75188890, gi|... - gi|75188890|ref|ZP_00702157.1| COG0557: Exoribonuclease R [Escherichia coli E24377A], gi|157156656|r...
gi|110808097, gi... - gi|110808097|ref|YP_691617.1| exoribonuclease R [Shigella flexneri 5 str. 8401], gi|110617645|gb|ABF...
gi|170021811, gi... - gi|170021811|ref|YP_001726765.1| exoribonuclease R [Escherichia coli ATCC 8739], gi|169756739|gb|ACA...
gi|218363500, gi... - gi|218556731|ref|YP_002389645.1| exoribonuclease R [Escherichia coli IAI1], gi|218363500|emb|CAR0115...
gi|218354660, gi... - gi|218697928|ref|YP_002405595.1| exoribonuclease R [Escherichia coli 55989], gi|218354660|emb|CAV016...
gi|170681596, gi... - gi|170681596|ref|YP_001746574.1| ribonuclease R [Escherichia coli SMS-3-5], gi|170519314|gb|ACB17492...
gi|194417183, gi... - gi|194434598|ref|ZP_03066855.1| ribonuclease R [Shigella dysenteriae 1012], gi|194417183|gb|EDX33295...
gi|75515418, gi|... - gi|75515418|ref|ZP_00737575.1| COG0557: Exoribonuclease R [Escherichia coli 53638], gi|188492518|ref...
gi|124528238, gi... - gi|124528238|ref|ZP_01699562.1| VacB and RNase II family 3'-5' exoribonucleases [Escherichia coli B]...
gi|192955794, gi... - gi|75234272|ref|ZP_00718660.1| COG0557: Exoribonuclease R [Escherichia coli E110019], gi|193070848|r...
gi|190904342, gi... - gi|75231228|ref|ZP_00717635.1| COG0557: Exoribonuclease R [Escherichia coli B7A], gi|191165647|ref|Z...
gi|75198025, gi|... - gi|75198025|ref|ZP_00708095.1| COG0557: Exoribonuclease R [Escherichia coli HS], gi|157163643|ref|YP...
|
0.0 |
[1..794] |
[1..795] |
gi|217325473, gi... - gi|217325473|ref|ZP_03441557.1| ribonuclease R [Escherichia coli O157:H7 str. TW14588], gi|217321694...
gi|209398640, gi... - gi|209398640|ref|YP_002273721.1| ribonuclease R [Escherichia coli O157:H7 str. EC4115], gi|209160040...
gi|208738865, gi... - gi|208818742|ref|ZP_03259062.1| ribonuclease R [Escherichia coli O157:H7 str. EC4042], gi|208738865|...
gi|208814409, gi... - gi|208814409|ref|ZP_03255738.1| ribonuclease R [Escherichia coli O157:H7 str. EC4045], gi|208735686|...
gi|254796198, gi... - gi|254796198|ref|YP_003081035.1| exoribonuclease R, RNase R [Escherichia coli O157:H7 str. TW14359],...
gi|208806677, gi... - gi|208806677|ref|ZP_03249014.1| ribonuclease R [Escherichia coli O157:H7 str. EC4206], gi|208726478|...
gi|195935969 - gi|195935969|ref|ZP_03081351.1| exoribonuclease R [Escherichia coli O157:H7 str. EC4024]
gi|38704239 - gi|38704239|ref|NP_313182.2| hypothetical protein ECs5155 [Escherichia coli O157:H7]
gi|38704239 - gi|38704239|ref|NP_313182.2| exoribonuclease R [Escherichia coli O157:H7 str. Sakai]
gi|168801833, gi... - gi|189376071|gb|EDU94487.1| ribonuclease R [Escherichia coli O157:H7 str. EC508], gi|168801833|ref|Z...
gi|189375137, gi... - gi|189375137|gb|EDU93553.1| ribonuclease R [Escherichia coli O157:H7 str. EC869], gi|168784815|ref|Z...
gi|168780610, gi... - gi|189001856|gb|EDU70842.1| ribonuclease R [Escherichia coli O157:H7 str. EC4076], gi|168780610|ref|...
gi|187770293, gi... - gi|187770293|gb|EDU34137.1| ribonuclease R [Escherichia coli O157:H7 str. EC4196], gi|168774109|ref|...
gi|168766457, gi... - gi|189364335|gb|EDU82754.1| ribonuclease R [Escherichia coli O157:H7 str. EC4486], gi|168766457|ref|...
gi|168760420, gi... - gi|189368979|gb|EDU87395.1| ribonuclease R [Escherichia coli O157:H7 str. EC4501], gi|168760420|ref|...
gi|189357916, gi... - gi|189357916|gb|EDU76335.1| ribonuclease R [Escherichia coli O157:H7 str. EC4401], gi|168754749|ref|...
gi|168751470, gi... - gi|188014490|gb|EDU52612.1| ribonuclease R [Escherichia coli O157:H7 str. EC4113], gi|168751470|ref|...
gi|161367456 - gi|161367456|ref|NP_290809.2| exoribonuclease R [Escherichia coli O157:H7 EDL933]
|
0.0 |
[1..794] |
[1..795] |