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View Structure Prediction Details

Protein: gi|221314460
Organism: Bacillus subtilis subsp. subtilis str. NCIB 3610
Length: 749 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221314460.

Description E-value Query
Range
Subject
Range
gi|56379914, gi|... - gi|56420072|ref|YP_147390.1| ATP-dependent RNA helicase [Geobacillus kaustophilus HTA426], gi|563799...
516.0 [0..1] [747..1]

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Predicted Domain #1
Region A:
Residues: [1-506]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKSLTELI SDLKGNENVV NWHEIEPREA KTRPMPESID ERIKAALSKR GIDELYTHQY  60
   61 SAFQYVQKGE SIVTVTPTAS GKTLCYNLPV LQSIAQDETN RALYLFPTKA LAQDQKSELN 120
  121 EIIDEMGIDI KSFTYDGDTS PAIRQKVRKA GHIVITNPDM LHSAILPHHT KWVSLFENLK 180
  181 YIVIDELHTY RGVFGSHVAN VIRRLKRICR FYGSDPVFIC TSATIANPKE LGEQLTGKPM 240
  241 RLVDDNGAPS GRKHFVFYNP PIVNKPLNIR RSATAEVNEL AKEFLKNKVQ TIVFARSRVR 300
  301 VEIILSHIQE LVKKEIGTKS IRGYRGGYLP KERREIERGL REGDILGVVS TNALELGVDI 360
  361 GQLQVCVMTG YPGSVASAWQ QAGRAGRRHG ESLIIMVANS TPIDQYIVRH PEYFFNRSPE 420
  421 SARINPENLI ILVDHLKCAA YELPFRADEE FGAMEVSDIL EYLQEEAVLH RNGERYHWAS 480
  481 ESFPASNISL RSASQENVVI VDQSDI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.0
Match: 2v8oA
Description: No description for 2v8oA was found.

Predicted Domain #2
Region A:
Residues: [507-610]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANVRIIGEMD RFSAMTLLHD EAIYLHEGVQ YQVEKLDWDH KKAYVRKVDV EYYTDANLAV  60
   61 QLKVLEIDKT KEKSRTSLHY GDVTVNALPT IFKKIKMTTF ENIG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [611-749]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGPIHLPEEE LHTSAAWLEI KTADEDIGEK TLEQLLLGIS NVLQHIVPVY IMCDRNDVHV  60
   61 VSQIKAAHTG LPTIFLYDHY PGGIGLAEEV FKRFSDINEA AKQLITHCPC HDGCPSCIGT 120
  121 EIEGIKAKER ILQLLDQMS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle