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View Structure Prediction Details

Protein: KXD1_YEAS6
Organism: Saccharomyces cerevisiae AWRI1631
Length: 218 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KXD1_YEAS6.

Description E-value Query
Range
Subject
Range
YGL079W - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
KXD1_YEASA - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEAS1 - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEAS8 - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEAS6 - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEAST - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEASO - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEASL - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEASV - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEAS7 - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
0.0 [1..218] [1..218]
CE09471 - status:Partially_confirmed UniProt:O02068 protein_id:AAB52924.1
0.007 [54..218] [171..319]

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Predicted Domain #1
Region A:
Residues: [1-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTGISEEND DEETFSAVHS STPSINSQSY AIPITEEMSS SFHDSISTTS NSSGSFDSDG  60
   61 SNVSDVVEQN EMDNESNVDE DLFLDNDIPQ SSNLLPTDAQ DPGPIFDVSR YIFDSLKQSI 120
  121 DSADFSEALS LQTKTSAVIN SKSLELKQYI DEMKSRLTQL QEKFENGEAT SKKIKRDLET 180
  181 SRKNIDYLNA ALRVDFPIEF NQAREKILER RLNEDHDC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [101-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPGPIFDVSR YIFDSLKQSI DSADFSEALS LQTKTSAVIN SKSLELKQYI DEMKSRLTQL  60
   61 QEKFENGEAT SKKIKRDLET SRKNIDYLNA ALRVDFPIEF NQAREKILER RLNEDHDC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle