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View Structure Prediction Details

Protein: gi|220943036
Organism: synthetic construct
Length: 436 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220943036.

Description E-value Query
Range
Subject
Range
gi|73972909 - gi|73972909|ref|XP_532135.2| PREDICTED: similar to bystin [Canis familiaris]
660.0 [0..3] [411..141]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKPKKANVA TIKNVNLEKQ ITEGRVAKNK NKDKVKLRAE ESANIDARSS QKILAAAKLQ  60
   61 QLELDEENFP SLVTVKKVNF SLNDGHVKED EEVNETDLMA DLDMDEDDVA AFERFQQPA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [120-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QEGKRTLHLS KMIMQKIQEK EADIHTKISD EGSLKIEEID PKVKEMYEGV RDVLKRYRSG  60
   61 KIPKAFKIIP KLRNWEQILF ITEPHNWSAA AMFQGTRIFC SVLSQAMAQR FYNLVLLPRV 120
  121 RDDLCEYKKL NMHLYNALKR ALFKPAAFMK GIILPLLEGG DCTLREAIIF GSVVARSSIP 180
  181 VLHSSACLLK ICEMAYSGAN SIFIRYFLDK RYALPYRVVD AAVFHFLRFE NDKRELPVLW 240
  241 HQSLLTFAQR YKNDISSEQR DALLQLLKKK SHFKITPDVR RELQAASCRD VEMMETDNGL 300
  301 AGQPAKMYTD ADVEYEG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.22
Match: 2ilrA
Description: No description for 2ilrA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle