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View Structure Prediction Details

Protein: gi|18422225, gi|...
Organism: Arabidopsis thaliana
Length: 218 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18422225, gi|....

Description E-value Query
Range
Subject
Range
gi|21553655 - gi|21553655|gb|AAM62748.1| unknown [Arabidopsis thaliana]
131.0 [0..1] [218..1]

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Predicted Domain #1
Region A:
Residues: [1-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIHLLYTVIF AEMALILLLL FKTPLRKLII LTFDRIKRGR GPVVVKTIGT TVFVVLLSSI  60
   61 YSLVNIQRRS EDGAVLNPTD QVLASKHLLE ASLMGFVLFL SLMIDRLHHY IRELRLLRKT 120
  121 METAKKQNRG FEDGKTTSGE EVKALGEEIA ALKAKIKTLE SESESKGKEL KGAQGETEAL 180
  181 RKQADGFLME YDRLLEDNQN LRNQLESIGH SPEGKKGM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.0
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle