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View Structure Prediction Details

Protein: gi|18391081, gi|...
Organism: Arabidopsis thaliana
Length: 487 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18391081, gi|....

Description E-value Query
Range
Subject
Range
gi|2160177, gi|2... - pir||A86233 hypothetical protein [imported] - Arabidopsis thaliana, gi|2160177|gb|AAB60740.1| EST gb...
376.0 [0..1] [487..1]

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Predicted Domain #1
Region A:
Residues: [1-487]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKTVWIIL LCLFVVSQAD QGFDVRHHLS TVTRYSTSKD VTQNLIEGSN VPSECTPIHL  60
   61 NLVARHGTRS PTKKRLRELE SLAGRFKELV RDAEARKLPS DKIPGWLGQW KSPWEGKVKG 120
  121 GELIRQGEDE LYQLGIRVRE RFPSLFEEDY HPDVYTIRAT QIPRASASAV AFGMGLFSEK 180
  181 GNLGPGRNRA FAVTSENRAS DTKLRFFECC QNYKSYRKAK EPAVDKLKEP VLNKITASVA 240
  241 KRYDLKFTKQ DISSLWFLCK QEASLLNVTN QSCELFTPSE VALLEWTDDL EVFLLKGYGN 300
  301 SLNYKMGVPL LEDVLHSMEE AIKAREEKLP PGSYEKARLR FAHAETIVPF SCLLGLFLDG 360
  361 SEFEKIQKEK PLELPPQPPK TRDFRGSTMA PFGGNNILVL YSCPAESSPK YFVQVLHNEH 420
  421 PIAVPGCDGK DFCPLEDFKA KVVTPHLKHA FDNLCNADLN DLKQKPASSK LSILSSWLFG 480
  481 SSHDTEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.39794
Match: 2gfiA
Description: No description for 2gfiA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle