YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|190691653, gi...
Organism:	synthetic construct
Length:	412 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190691653, gi....

Description	E-value	Query Range	Subject Range
ASSY_BACLD - Argininosuccinate synthase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 1...	0.0	[1..412]	[1..402]
ASSY_BACHD - Argininosuccinate synthase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM... ASSY_BACHD - Argininosuccinate synthase OS=Bacillus halodurans GN=argG PE=3 SV=1	0.0	[2..406]	[1..395]
ASSY_ANAVT - Argininosuccinate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=argG PE=3 SV=1	0.0	[1..407]	[1..399]
ASSY_NOSS1 - Argininosuccinate synthase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=argG PE=3 SV=1 gi\|25293783 - pir\|\|AF2405 argininosuccinate synthase [imported] - Nostoc sp. (strain PCC 7120)	0.0	[1..407]	[1..399]
gi\|221324414 - gi\|221324414\|ref\|ZP_03605708.1\| argininosuccinate synthase [Bacillus subtilis subsp. subtilis str. S... gi\|221315214 - gi\|221315214\|ref\|ZP_03597019.1\| argininosuccinate synthase [Bacillus subtilis subsp. subtilis str. N... gi\|221320132 - gi\|221320132\|ref\|ZP_03601426.1\| argininosuccinate synthase [Bacillus subtilis subsp. subtilis str. J... ASSY_BACSU - Argininosuccinate synthase OS=Bacillus subtilis (strain 168) GN=argG PE=3 SV=1 ASSY_BACSU - Argininosuccinate synthase OS=Bacillus subtilis GN=argG PE=3 SV=1	0.0	[1..412]	[1..402]
ASSY_BACCZ - Argininosuccinate synthase OS=Bacillus cereus (strain ZK / E33L) GN=argG PE=3 SV=1 gi\|196025249, gi... - gi\|196043913\|ref\|ZP_03111150.1\| argininosuccinate synthase [Bacillus cereus 03BB108], gi\|196025249\|g... ASSY_BACC3 - Argininosuccinate synthase OS=Bacillus cereus (strain 03BB102) GN=argG PE=3 SV=1 ASSY_BACAH - Argininosuccinate synthase OS=Bacillus thuringiensis (strain Al Hakam) GN=argG PE=3 SV=2	0.0	[2..409]	[1..398]
gi\|254754624 - gi\|254754624\|ref\|ZP_05206659.1\| argininosuccinate synthase [Bacillus anthracis str. Vollum] gi\|254757456 - gi\|254757456\|ref\|ZP_05209483.1\| argininosuccinate synthase [Bacillus anthracis str. Australia 94] gi\|254736741 - gi\|254736741\|ref\|ZP_05194447.1\| argininosuccinate synthase [Bacillus anthracis str. Western North Am... gi\|254741778 - gi\|254741778\|ref\|ZP_05199465.1\| argininosuccinate synthase [Bacillus anthracis str. Kruger B] gi\|30264704, gi\|... - gi\|30264704\|ref\|NP_847081.1\| argininosuccinate synthase [Bacillus anthracis str. Ames], gi\|30259379\|... ASSY_BACAN - Argininosuccinate synthase OS=Bacillus anthracis GN=argG PE=3 SV=1 gi\|49187522, gi\|... - gi\|49187522\|ref\|YP_030775.1\| argininosuccinate synthase [Bacillus anthracis str. Sterne], gi\|4918144... gi\|47530173, gi\|... - gi\|47530173\|ref\|YP_021522.1\| argininosuccinate synthase [Bacillus anthracis str. 'Ames Ancestor'], g... gi\|177651161, gi... - gi\|177651161\|ref\|ZP_02933992.1\| argininosuccinate synthase [Bacillus anthracis str. A0174], gi\|17208... gi\|170129515, gi... - gi\|170705390\|ref\|ZP_02895854.1\| argininosuccinate synthase [Bacillus anthracis str. A0389], gi\|17012... gi\|190569076, gi... - gi\|190569076\|ref\|ZP_03021976.1\| argininosuccinate synthase [Bacillus anthracis Tsiankovskii-I], gi\|1... gi\|167634048, gi... - gi\|167634048\|ref\|ZP_02392371.1\| argininosuccinate synthase [Bacillus anthracis str. A0442], gi\|16753... gi\|254687441 - gi\|254687441\|ref\|ZP_05151297.1\| argininosuccinate synthase [Bacillus anthracis str. CNEVA-9066] gi\|164714431, gi... - gi\|165869602\|ref\|ZP_02214260.1\| argininosuccinate synthase [Bacillus anthracis str. A0488], gi\|16471... gi\|254725004 - gi\|254725004\|ref\|ZP_05186787.1\| argininosuccinate synthase [Bacillus anthracis str. A1055] gi\|170685699, gi... - gi\|170685699\|ref\|ZP_02876922.1\| argininosuccinate synthase [Bacillus anthracis str. A0465], gi\|17067... ASSY_BACAC - Argininosuccinate synthase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=argG PE=3 SV=1 gi\|167513930, gi... - gi\|167638113\|ref\|ZP_02396391.1\| argininosuccinate synthase [Bacillus anthracis str. A0193], gi\|16751... ASSY_BACAA - Argininosuccinate synthase OS=Bacillus anthracis (strain A0248) GN=argG PE=3 SV=1	0.0	[2..409]	[1..398]
ASSY_BACCN - Argininosuccinate synthase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391...	0.0	[2..409]	[1..398]
ASSY_BACHK - Argininosuccinate synthase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=argG PE=3 SV... ASSY_BACHK - Argininosuccinate synthase OS=Bacillus thuringiensis subsp. konkukian GN=argG PE=3 SV=1	0.0	[2..409]	[1..398]
ASSY_NOSP7 - Argininosuccinate synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=argG PE=3 SV=1	0.0	[1..404]	[1..396]

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Predicted Domain #1

Region A:
Residues: [1-412]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKGSVVLA YSGGLDTSCI LVWLKEQGYD VIAYLANIGQ KEDFEEARKK ALKLGAKKVF  60
   61 IEDVSREFVE EFIWPAIQSS ALYEDRYLLG TSLARPCIAR KQVEIAQREG AKYVSHGATG 120
  121 KGNDQVRFEL SCYSLAPQIK VIAPWRMPEF YNRFKGRNDL MEYAKQHGIP IPVTPKNPWS 180
  181 MDENLMHISY EAGILENPKN QAPPGLYTKT QDPAKAPNTP DILEIEFKKG VPVKVTNVKD 240
  241 GTTHQTSLEL FMYLNEVAGK HGVGRIDIVE NRFIGMKSRG IYETPAGTIL YHAHLDIEAF 300
  301 TMDREVRKIK QGLGLKFAEL VYTGFWHSPE CEFVRHCIAK SQERVEGKVQ VSVLKGQVYI 360
  361 LGRESPLSLY NEELVSMNVQ GDYEPTDATG FININSLRLK EYHRLQSKVT AK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	134.0
Match:	2nz2A
Description:	No description for 2nz2A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits