YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|221317107
Organism: Bacillus subtilis subsp. subtilis str. JH642
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221317107.

Description E-value Query
Range
Subject
Range
gi|52001749, gi|... - gi|52783900|ref|YP_089729.1| YabG [Bacillus licheniformis ATCC 14580], gi|52346402|gb|AAU39036.1| Ya...
476.0 [0..1] [289..7]

Back

Predicted Domain #1
Region A:
Residues: [1-68]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFQIGDMVA RKSYQMDVLF RIIGIEQTSK GNSIAILHGD EVRLIADSDF SDLVAVKKDE  60
   61 QMMRKKKD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [69-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESRMNESLEL LRQDYKLLRE KQEYYATSQY QHQEHYFHMP GKVLHLDGDE AYLKKCLNVY  60
   61 KKIGVPVYGI HCHEKKMSAS IEVLLDKYRP DILVITGHDA YSKQKGGI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [177-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDLNAYRHSK HFVETVQTAR KKIPHLDQLV IFAGACQSHF ESLIRAGANF ASSPSRVNIH  60
   61 ALDPVYIVAK ISFTPFMERI NVWEVLRNTL TREKGLGGIE TRGVLRIGMP YKSN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle