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View Structure Prediction Details

Protein: gi|115483476, gi...
Organism: Oryza sativa Japonica Group
Length: 202 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115483476, gi....

Description E-value Query
Range
Subject
Range
gi|220944342, gi... - gi|220954132|gb|ACL89609.1| MED31-PA [synthetic construct], gi|220944342|gb|ACL84714.1| MED31-PA [sy...
FBpp0293855, MED... - The gene Mediator complex subunit 31 is referred to in FlyBase by the symbol Dmel\MED31 (CG1057, FBg...
225.0 [0..9] [172..13]

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Predicted Domain #1
Region A:
Residues: [1-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPEAMPAPD PNDARQRFLL ELEFIQCLAN PTYIHYLAQN RYFEDEAFIG YLKYLKYWQR  60
   61 PEYIKYIMYP HCLFFLELLQ NANFRNAMAH PASKEVAHRQ QYFFWKNYRN NRLKHILPRP 120
  121 PPEPTPAPAP APAPATVPPA APVPSTVVPP VAAPSSSLPP MSAAGASAMS PMQFAGTPGT 180
  181 NIPKNDMRNV MGGQGGRKRK MG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.982
Match: 1pk8A
Description: Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle