YRC Public Data Repository - Protein Structure Prediction

Protein:	P5CR1_PONAB
Organism:	Pongo abelii
Length:	319 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P5CR1_PONAB.

Description	E-value	Query Range	Subject Range
P5CR2_PONPY - Pyrroline-5-carboxylate reductase 2 - Pongo pygmaeus (Orangutan) P5CR2_PONAB - Pyrroline-5-carboxylate reductase 2 OS=Pongo abelii GN=PYCR2 PE=2 SV=1	2.0E-55	[1..318]	[1..318]
gi\|114572916 - gi\|114572916\|ref\|XP_514237.2\| PREDICTED: pyrroline-5-carboxylate reductase family, member 2 isoform ...	4.0E-55	[1..318]	[1..318]
PYCR2 - pyrroline-5-carboxylate reductase family, member 2	6.0E-55	[1..318]	[1..318]
P5CR2_MACFA - Pyrroline-5-carboxylate reductase 2 OS=Macaca fascicularis GN=PYCR2 PE=2 SV=1 gi\|109018076 - gi\|109018076\|ref\|XP_001092867.1\| PREDICTED: similar to pyrroline-5-carboxylate reductase family, mem...	2.0E-54	[1..318]	[1..318]
P5CR2_BOVIN - Pyrroline-5-carboxylate reductase 2 OS=Bos taurus GN=PYCR2 PE=2 SV=1	2.0E-54	[1..318]	[1..318]
P5CR2_MOUSE - Pyrroline-5-carboxylate reductase 2 OS=Mus musculus GN=Pycr2 PE=1 SV=1 gi\|53733688 - gb\|AAH84027.1\| Unknown (protein for MGC:98219) [Xenopus laevis]	3.0E-54	[1..318]	[1..318]
gi\|194708014, gi... - gi\|226491048\|ref\|NP_001142286.1\| hypothetical protein LOC100274455 [Zea mays], gi\|194708014\|gb\|ACF88... P5CR2_RAT - Pyrroline-5-carboxylate reductase 2 OS=Rattus norvegicus GN=Pycr2 PE=2 SV=1	6.0E-54	[1..318]	[1..318]

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Predicted Domain #1

Region A:
Residues: [1-319]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVGFIGAGQ LAFALAKGFT AAGVLAAHKI MASSPDMDLA TVSALRKMGV KLTPHNKETV  60
   61 QHSDVLFLAV KPHIIPFILD EIGADIEDRH IVVSCAAGVT ISSIEKKLSA FRPAPRVIRC 120
  121 MTNTPVVVRE GATVYATGTH AQVEDGRLME QLLSSVGFCT EVEEDLIDAV TGLSGSGPAY 180
  181 AFTALDALAD GGVKMGLPRR LAVRLGAQAL LGAAKMLLHS EQHPGQLKDN VSSPGGATIH 240
  241 ALHVLESGGF RSLLINAVEA SCIRTRELQS MADQEQVSPA AIKKTILDKV KLDSPAGTAL 300
  301 SPSGHTKLLP RSLAPAGKD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	56.0
Match:	2gerA
Description:	No description for 2gerA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits