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View Structure Prediction Details

Protein: DBR1_ARATH
Organism: Arabidopsis thaliana
Length: 418 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DBR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|6019470, gi|7... - ref|NP_057300.1| debranching enzyme homolog 1 [Homo sapiens], gi|6019470|gb|AAD53327.2| RNA lariat ...
516.0 [0..1] [414..1]
gi|109049199 - gi|109049199|ref|XP_001114637.1| PREDICTED: similar to debranching enzyme homolog 1 isoform 2 [Macac...
509.0 [0..1] [406..1]
gi|13324555 - gi|13324555|gb|AAK18789.1|AF300293_1 RNA lariat debranching enzyme [Mus musculus]
507.0 [0..1] [407..1]
gi|73990217 - gi|73990217|ref|XP_852077.1| PREDICTED: similar to debranching enzyme homolog 1 isoform 2 [Canis fam...
505.0 [0..1] [406..1]
gi|149018796, gi... - gi|187469695|gb|AAI66797.1| Debranching enzyme homolog 1 (S. cerevisiae) [Rattus norvegicus], gi|157...
502.0 [0..1] [407..1]

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Predicted Domain #1
Region A:
Residues: [1-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIAIEGCMH GDLDNVYKTI QHYEQIHNTK VDLLLCCGDF QAVRNEKDMD SLNVPRKYRE  60
   61 MKSFWKYYSG QEVAPIPTIF IGGNHEASNY LWELYYGGWA ATNIYFLGFA GVVKFGNVRI 120
  121 GGLSGIYNER HYRSGHFERP PYNESTIRSV YHVRDYDVQK LMQLEEPLDI FLSHDWPVGI 180
  181 TDYGDSESLM RQKPYFRQEI EEKTLGSKPA ALLLEKLKPQ YWFSAHLHCK FAAAVQHGND 240
  241 GSVTKFLALD KCLPGKKFLQ IIEIESEPGP FEVLYDEEWL AITRKFNSIF PLTRRYTNVS 300
  301 TAGTIQESRE WVRKKLEERQ FKPFEFARTV PAYNPSQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.69897
Match: 2q8uA
Description: No description for 2q8uA was found.

Predicted Domain #2
Region A:
Residues: [338-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RVFDSIPEIP QNPQTLSLLE LLGLPYLLDS SPVTGERTDI PASLAPSDLP TYDSEEIPID  60
   61 DIDEIEEMEE AKADDHTRDD A

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle