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View Structure Prediction Details

Protein: ASHH1_ARATH
Organism: Arabidopsis thaliana
Length: 492 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASHH1_ARATH.

Description E-value Query
Range
Subject
Range
gi|25406461, gi|... - gi|6143888|gb|AAF04434.1|AC010718_3 unknown protein; 29143-26659 [Arabidopsis thaliana], pir||E96795...
311.0 [0..1] [492..1]
gi|34529091 - gi|34529091|dbj|BAC85636.1| unnamed protein product [Homo sapiens]
294.0 [0..8] [487..2]
gi|162463380, gi... - gi|22121720|gb|AAM89289.1| SET domain-containing protein SET102 [Zea mays], gi|162463380|ref|NP_0011...
293.0 [0..15] [481..11]
gi|38345452, gi|... - gi|50882048|ref|NP_910121.2| OSJNBa0042L16.7 [Oryza sativa (japonica cultivar-group)], emb|CAD41014....
292.0 [0..17] [481..14]
gi|92881067 - gi|92881067|gb|ABE86023.1| Nuclear protein SET; SET-related region; AWS [Medicago truncatula]
290.0 [0..12] [487..7]
gi|116309320 - gi|116309320|emb|CAH66406.1| OSIGBa0093L02.2 [Oryza sativa (indica cultivar-group)]
288.0 [0..17] [481..15]
gi|26346681 - gi|26346681|dbj|BAC36989.1| unnamed protein product [Mus musculus]
238.0 [0..1] [231..338]
gi|109504622, gi... - gi|109505410|ref|XP_001066409.1| PREDICTED: similar to nuclear receptor binding SET domain protein 1...
232.0 [0..10] [489..1861]
SET2_GIBZE - Histone-lysine N-methyltransferase, H3 lysine-36 specific OS=Gibberella zeae GN=SET2 PE=3 SV=1
SET2_GIBZE - Histone-lysine N-methyltransferase, H3 lysine-36 specific OS=Gibberella zeae (strain PH-1 / ATCC MYA...
230.0 [0..3] [483..218]

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Predicted Domain #1
Region A:
Residues: [1-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFSCDPDQE GDELPQYEHI YQNDFSYRKH KKQKEEDISI CECKFDFGDP DSACGERCLN  60
   61 VITNTECTPG YCPCGVYCKN QKFQKCEYAK TKLIKCEGRG WGLVALEEIK AGQFIMEYCG 120
  121 EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN 180
  181 VLGEVRVGIF AKESISPRTE LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.69897
Match: 2o8jA
Description: No description for 2o8jA was found.

Predicted Domain #2
Region A:
Residues: [239-319]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TYVWEDGDDR YSVDKIPVYD SAEDELTSEP SKNGESNTNE EKEKDISTEN HLESTALNIQ  60
   61 QQSDSTPTPM EEDVVTETVK T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [320-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETSEDMKLLS QNSQEDSSPK TAIVSRVHGN ISKIKSESLP KKRGRPFSGG KTKNVAQKHV  60
   61 DIANVVQLLA TKEAQDEVLK YEEVKKEAAV RLSSLYDEIR PAIEEHERDS QDSVATSVAE 120
  121 KWIQASCNKL KAEFDLYSSV IKNIASTPIK PQDTKTKVAE AGNEDHIKLL EAK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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