YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FB37_ARATH
Organism: Arabidopsis thaliana
Length: 518 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FB37_ARATH.

Description E-value Query
Range
Subject
Range
gi|55770563 - ref|XP_550272.1| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cultivar-group...
gi|115434762, gi... - gi|55770563|ref|XP_550272.1| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cu...
298.0 [0..1] [517..102]

Back

Predicted Domain #1
Region A:
Residues: [1-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQSTSAAGN SILNRRRSKS FTLKFPIESI ESEISQPDYT SSLPDECLAL VFQFLNSGNR  60
   61 KRCALVCRRW MIVEGQNRYR LSLHARSDLI TSIPSLFSRF DSVTKLSLKC DRRSVSIGDE 120
  121 ALVKISLRCR NLKRLKLRAC RELTDVGMAA FAENCKDLKI FSCGSCDFGA KGVKAVLDHC 180
  181 SNLEELSIKR LRGFTDIAPE MIGPGVAASS LKSICLKELY NGQCFGPVIV GAKNLKSLKL 240
  241 FRCSGDWDLL LQEMSGKDHG VVEIHLERMQ VSDVALSAIS YCSSLESLHL VKTPECTNFG 300
  301 LAAIAEKCKR LRKLHIDGWK ANLIGDEGLV AVAKFCSQLQ ELVLIGVNPT TLSLGMLAAK 360
  361 CLNLERLALC GCDTFGDPEL SCIAAKCPAL RKLCIKNCPI SDVGIENLAN GCPGLTKVKI 420
  421 KKCKGVLGGC ADWLRTVRPM LSVNADTMEQ EHEEAASNDV VGGSQENGIE FPQLNSQIMA 480
  481 SSIASSSRNR SGYFKSGIGL FSGMSLVPCT SRQRRASR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.69897
Match: 2z63A
Description: No description for 2z63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle