YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|79317690, gi\|...
Organism:	Arabidopsis thaliana
Length:	232 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|79317690, gi|....

Description	E-value	Query Range	Subject Range
gi\|18377845, gi\|... - gi\|79587736\|ref\|NP_849644.2\| ATGLX1 (GLYOXALASE I HOMOLOG); lactoylglutathione lyase/ metal ion bind...	222.0	[0..1]	[229..1]
LGUL_BRAOG - Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1 LGUL_BRAOL - (Q39366) Putative lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxal...	210.0	[0..1]	[229..1]
gi\|2213425 - gi\|2213425\|emb\|CAB09799.1\| hypothetical protein [Citrus x paradisi]	207.0	[0..6]	[229..12]
gi\|7619802 - gi\|7619802\|emb\|CAB50787.2\| putative glyoxalase I [Triticum aestivum]	206.0	[0..2]	[231..7]
gi\|37932483, gi\|... - gi\|37932483\|gb\|AAP76396.1\| glyoxalase I [Zea mays], gi\|162461576\|ref\|NP_001105217.1\| glyoxalase I [Z...	199.0	[0..1]	[229..1]
gi\|125560421 - gi\|125560421\|gb\|EAZ05869.1\| hypothetical protein OsI_28106 [Oryza sativa Indica Group] LGUL_ORYSA - Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ke... LGUL_ORYSJ - Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2	199.0	[0..1]	[229..1]

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Predicted Domain #1

Region A:
Residues: [1-142]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEASDLLEW PKKDNRRFLH VVYRVGDLDR TIEFYTEVFG MKLLRKRDIP EEKYSNAFLG  60
   61 FGPETSNFVV ELTYNYGVSS YDIGTGFGHF AISTQDVSKL VENVRAKGGN VTREPGPVKG 120
  121 GGSVIAFVKD PDGYTFELIQ RG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	32.0
Match:	1f9zA
Description:	Glyoxalase I (lactoylglutathione lyase)
Matching Structure (courtesy of the PDB):

Predicted Domain #2

Region A:
Residues: [143-232]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTPEPFCQVM LRVGDLDRAI KFYEKALGMR LLRKIERPEY KYTIGMMGYA EEYESIVLEL  60
   61 TYNYDVTEYT KGNAYAQAQM MCTKAVKLLR

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	4.82
Match:	1f9zA
Description:	Glyoxalase I (lactoylglutathione lyase)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits