| Protein: | gi|15220413, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 352 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15220413, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
236.0 | [0..1] | [342..1] |
|
|
161.0 | [0..88] | [351..220] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MSRRFNPLED PPSASSSDEE GKEIARNSSS DDEDDVSSEN PSPLKTTLDA VSDSESGSDE 60
61 ETDSDSELEK KKDQVVTNPV DVKRAKKVKT SEKSGAKRSL EVDEAAVSMD VKRAKKVSGE 120
121 EEKKKSGGGG EETKKTYFQR LWTEDDEI
|
| Detection Method: |  |
| Confidence: | 1.7 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [149-233] |
1 11 21 31 41 51
| | | | | |
1 VVLQGLIDDK KDTGVSNTNK VYELVKKSIS FDVSKNQLME KLRALKKKYE NNLGKAKDGV 60
61 EPTFVKPHDR KAFELSKLVW GGIRM
|
| Detection Method: | |
| Confidence: | 55.79588 |
| Match: | PF04504.5 |
| Description: | No description for PF04504.5 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.806 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.786 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.700 | N/A | N/A | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.618 | N/A | N/A | a.60.14 | Description not found. |
| View | Download | 0.604 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.576 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.576 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.570 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.540 | N/A | N/A | a.112.1 | Description not found. |
|
Region A: Residues: [234-352] |
1 11 21 31 41 51
| | | | | |
1 ALASGMKSNE KSKKSSKFES VKHELDSSLP NSKNNCEDEV MDEGEVSFTK SSLVRSIVGL 60
61 GMDELTAQQG LSKLASKDMK RFYEQWKAMQ AREFEFFLQK HGFLFEVLSK ISEAFGSNA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.526 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.526 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.440 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.440 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.409 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.402 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.400 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.328 | N/A | N/A | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.314 | N/A | N/A | a.91.1 | Regulator of G-protein signalling, RGS |
