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View Structure Prediction Details

Protein: gi|30682152
Organism: Arabidopsis thaliana
Length: 808 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|30682152.

Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIHLGEIGI VLFPWFLWLS LFLSCGYAAI TISSPLTLGQ TLSSPGGFYE LGFFSPNNSQ  60
   61 NQYVGIWFKK ITPRVVVWVA NREKPITTPV ANLTISRNGS LILLDSSKNV VWSTRRPSIS 120
  121 NKCHAKLLDT GNLVIVDDVS ENLLWQSFEN PGDTMLPYSS LMYNLATGEK RVLSSWKSHT 180
  181 DPSPGDFVVR LTPQVPAQIV TMRGSSVYKR SGP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 1dlpA
Description: Fetuin-binding protein Scafet precursor
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [214-416]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WAKTGFTGVP LMDESYTSPF SLSQDVGNGT GLFSYLQRSS ELTRVIITSE GYLKTFRYNG  60
   61 TGWVLDFITP ANLCDLYGAC GPFGLCVTSN PTKCKCMKGF VPKYKEEWKR GNMTSGCMRR 120
  121 TELSCQANLS TKTQGKGVDV FYRLANVKPP DLYEYASFVD ADQCHQGCLS NCSCSAFAYI 180
  181 TGIGCLLWNH ELIDTIRYSV GGE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [417-808]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FLSIRLASSE LAGSRRTKII VGSISLSIFV ILAFGSYKYW RYRAKQNDSW KNGLEPQEIS  60
   61 GLTFFEMNTI RAATNNFNVS NKLGQGGFGP VYKGTLSDKK DIAVKRLSSS SGQGTEEFMN 120
  121 EIKLISKLQH RNLVRLLGCC IDGEEKLLIY EFLVNKSLDT FLFDLTLKLQ IDWPKRFNII 180
  181 QGVSRGLLYL HRDSCMRVIH RDLKVSNILL DDKMNPKISD FGLARMFQGT QHQDNTRKVV 240
  241 GTLGYMSPEY AWTGMFSEKS DIYAFGVLLL EIISGKKISS FCCGEEGKTL LGHAWECWLE 300
  301 TGGVDLLDED ISSSCSPVEV EVARCVQIGL LCIQQQAVDR PNIAQVVTMM TSATDLPRPK 360
  361 QPLFALQIQD QESVVSVSKS VNHVTQTEIY GR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.522879
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle