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View Structure Prediction Details

Protein: gi|42572099
Organism: Arabidopsis thaliana
Length: 302 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42572099.

Description E-value Query
Range
Subject
Range
gi|58387706, gi|... - gi|58387706|ref|XP_315751.2| ENSANGP00000013849 [Anopheles gambiae str. PEST], gi|55238539|gb|EAA116...
206.0 [0..2] [283..3]

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Predicted Domain #1
Region A:
Residues: [1-59]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTVLDSHFL ALTAIVTVIY QFIFFVITAL FKFDQVTDFA GSTNFVILAV LTLVLKASW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [60-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HFRQIVLTLL VVVWGLRLGI FLLMRILQWG EDRRFDEQRG NIVRLIIFWT LQAVWVWTVS  60
   61 LPLTLVNASD GGGSLKPADV IGWTMWVFGF LIEAAADQQK LSFKNSPENR GKWCDVGVWK 120
  121 YSRHPNYFGE MLLWWGIFVA ASPVLEGAEY LVIFGPLFLT LLLLFVSGIP LLEASADKKH 180
  181 GNSGAYRSYK KTTSPLILFP RGVYGNLPGW FKTVFLFEFP FYSRNLPQEG RLQNSKEKEV 240
  241 KDD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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