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View Structure Prediction Details

Protein: gi|18410388, gi|...
Organism: Arabidopsis thaliana
Length: 147 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18410388, gi|....

Description E-value Query
Range
Subject
Range
gi|21593596 - gi|21593596|gb|AAM65563.1| lipid transfer protein, putative [Arabidopsis thaliana]
114.0 [0..1] [147..1]

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Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEINKFLAVV VAVVVLYSVE ATAQGGNPQL TACLQKLLPC QPYIHSLNPP PPPSCCGPMK  60
   61 EIVEKDAPCL CIAFNNPEVL KALNLTKENA LLLPKACGVN PDVSLCSKIA TPSPIASPGS 120
  121 TNGTSSASTI SFNRFSFLSA FVAMIFF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.154902
Match: 1be2A
Description: LIPID TRANSFER PROTEIN COMPLEXED WITH PALMITATE, NMR, 10 STRUCTURES
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle