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View Structure Prediction Details

Protein: ASPL2_ARATH
Organism: Arabidopsis thaliana
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASPL2_ARATH.

Description E-value Query
Range
Subject
Range
gi|118344558, gi... - gi|55771082|dbj|BAD69801.1| cathepsin D1 [Takifugu rubripes], gi|118344558|ref|NP_001072052.1| cathe...
294.0 [0..8] [425..1]

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Predicted Domain #1
Region A:
Residues: [1-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRRKLCIV VAVFVIVIEF ASANFVFKAQ HKFAGKKKNL EHFKSHDTRR HSRMLASIDL  60
   61 PLGGDSRVDS VGLYFTKIKL GSPPKEYHVQ VDTGSDILWI NCKPCPKCPT KTNLNFRLSL 120
  121 FDMNASSTSK KVGCDDDFCS FISQSDSCQP ALGCSYHIVY ADESTSDGKF IRDMLTLEQV 180
  181 TGDLKTGPLG QEVVFGCGSD QSGQLGNGDS AVDGVMGFGQ SNTSVLSQLA ATGDAKRVFS 240
  241 HCLDNVKGGG IFAVGVVDSP KVKTTPMVPN QMHYNVMLMG MDVDGTSLDL PRSIVRNGGT 300
  301 IVDSGTTLAY FPKVLYDSLI ETILARQPVK LHIVEETFQC FSFSTNVDEA FPPVSFEFED 360
  361 SVKLTVYPHD YLFTLEEELY CFGWQAGGLT TDERSEVILL GDLVLSNKLV VYDLDNEVIG 420
  421 WADHNCSSSI KIKDGSGGVY SVGADNLSSA PRLLMITKLL TILSPLIVMA FTSLA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.69897
Match: 1qdmA
Description: (Pro)phytepsin; Plant acid proteinase, phytepsin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.01508543827677 bayes_pls_golite062009
hydrolase activity 0.77554493777157 bayes_pls_golite062009
peptidase activity 0.68518523369811 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.43925265235199 bayes_pls_golite062009
endopeptidase activity 0.43264884039584 bayes_pls_golite062009
aspartic-type endopeptidase activity 0.30585066730542 bayes_pls_golite062009
aspartic-type peptidase activity 0.30585066730542 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle