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View Structure Prediction Details

Protein: PPR91_ARATH
Organism: Arabidopsis thaliana
Length: 630 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPR91_ARATH.

Description E-value Query
Range
Subject
Range
PPR99_ARATH - Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana GN=At1g...
544.0 [0..1] [630..1]

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Predicted Domain #1
Region A:
Residues: [1-630]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISFAIAST AKRFVHRSLV VRGNAATVSP SFSFFWRRAF SGKTSYDYRE KLSRNGLSEL  60
   61 KLDDAVALFG EMVKSRPFPS IIEFSKLLSA IAKMNKFDVV ISLGEQMQNL GIPHNHYTYS 120
  121 ILINCFCRRS QLPLALAVLG KMMKLGYEPN IVTLSSLLNG YCHSKRISEA VALVDQMFVT 180
  181 GYQPNTVTFN TLIHGLFLHN KASEAMALID RMVAKGCQPD LVTYGVVVNG LCKRGDTDLA 240
  241 FNLLNKMEQG KLEPGVLIYN TIIDGLCKYK HMDDALNLFK EMETKGIRPN VVTYSSLISC 300
  301 LCNYGRWSDA SRLLSDMIER KINPDVFTFS ALIDAFVKEG KLVEAEKLYD EMVKRSIDPS 360
  361 IVTYSSLING FCMHDRLDEA KQMFEFMVSK HCFPDVVTYN TLIKGFCKYK RVEEGMEVFR 420
  421 EMSQRGLVGN TVTYNILIQG LFQAGDCDMA QEIFKEMVSD GVPPNIMTYN TLLDGLCKNG 480
  481 KLEKAMVVFE YLQRSKMEPT IYTYNIMIEG MCKAGKVEDG WDLFCNLSLK GVKPDVVAYN 540
  541 TMISGFCRKG SKEEADALFK EMKEDGTLPN SGCYNTLIRA RLRDGDREAS AELIKEMRSC 600
  601 GFAGDASTIG LVTNMLHDGR LDKSFLDMLS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.221849
Match: 1xi4A
Description: Clathrin D6 Coat
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle