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View Structure Prediction Details

Protein: gi|22329451
Organism: Arabidopsis thaliana
Length: 165 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22329451.

Description E-value Query
Range
Subject
Range
gi|3860167, gi|2... - gi|3860167|gb|AAC72979.1| disease resistance protein RPP1-WsC [Arabidopsis thaliana], pir||T52348 di...
218.0 [0..2] [163..73]

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Predicted Domain #1
Region A:
Residues: [1-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSSSNRKI QVFINFRGEE LRCSFVSHLV DAFKRHGINF FIDKDEQKGK DLKHLFARIK  60
   61 QSRMALTIFS KRYAESSWCL DELARIKKRA DKCKLRVVPI FFKVKAESVR YQKAEFGRNF 120
  121 WRLAKTSSGE QIKKWKEALE SVSDKVGLTL GDKRTNKWVQ MYING

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.0
Match: 1fyvA
Description: Toll-like receptor 1, TLR1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle