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View Structure Prediction Details

Protein: gi|42571811
Organism: Arabidopsis thaliana
Length: 489 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571811.

Description E-value Query
Range
Subject
Range
AROA_ARATH - 3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic OS=Arabidopsis thaliana GN=At2g45300 PE=...
524.0 [0..4] [489..60]

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Predicted Domain #1
Region A:
Residues: [1-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNGSEIRPV KVRASVSTAE KASEIVLQPI REISGLIKLP GSKSLSNRIL LLAALSEGTT  60
   61 VVDNLLNSDD INYMLDALKI LGLNVETHSE NNRAVVEGCG GVFPASIDSK SDIELYLGNA 120
  121 GTAMRPLTAA VTAAGGNASY VLDGVPRMRE RPIGDLVVGL KQLGADVECT LGTNCPPVRV 180
  181 NANGGLPGGK VKLSGSISSQ YLTALLMAAP LALGDVEIEI VDKLISVPYV EMTLKLMERF 240
  241 GVSAEHSESW DRFFVKGGQK YKSPGNAYVE GDASSASYFL AGAAITGETV TVEGCGTTSL 300
  301 QGDVKFAEVL EKMGCKVSWT ENSVTVTGPS RDAFGMRHLR AIDVNMNKMP DVAMTLAVVA 360
  361 LFADGPTTIR DVASWRVKET ERMIAICTEL RKVKFFFSLS LSVYSAHSKK FCGICVQLGA 420
  421 TVEEGSDYCV ITPPKKVKPA EIDTYDDHRM AMAFSLAACA DVPITINDPG CTRKTFPDYF 480
  481 QVLERITKH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 129.0
Match: 2qfqA
Description: No description for 2qfqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle