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View Structure Prediction Details

Protein: gi|18394744, gi|...
Organism: Arabidopsis thaliana
Length: 382 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18394744, gi|....

Description E-value Query
Range
Subject
Range
gi|21593178 - gi|21593178|gb|AAM65127.1| unknown [Arabidopsis thaliana]
295.0 [0..1] [382..1]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEQSPSQPS TQCQSHPQSP KPDTHNLIPP ESTDECLDSA GVSGSIVSST TIDARRITEL  60
   61 GNVSSPPSKI PLRPRKIRKL TLDGDVSGED YKAEDISSSQ VNSPLATDGK SPGKGKLSHL 120
  121 RAITVPRIQA RPL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [134-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TCEGELETAI HYLRNADPLL AALIDVHPPP TFESFKTPFL ALIRNILYQQ LAMKAGNSIY  60
   61 TRFVSLCGGE NLVVPETVLS LNPQQLRQIG VSGRKASYLH DLARKYQNGI LSDSAILNMD 120
  121 EKSLFTMLTM VNGIGSWSVH MFMINSLHRP DVLPVNDLGV RKGVQLLYGL DDLPRPSQME 180
  181 QHCAKWRPYR SVGSWYMWRL IEAKSTSTSA AVAAGVSLPP LEDIQQEHQQ QQLMDPLNGV 240
  241 FSIGAWGQS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.0
Match: 2h56A
Description: No description for 2h56A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle