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View Structure Prediction Details

Protein: gi|30684124
Organism: Arabidopsis thaliana
Length: 502 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30684124.

Description E-value Query
Range
Subject
Range
gi|6899648, gi|2... - gi|6899648|gb|AAF31025.1|AC012189_7 Contains Thioredoxin domain PF|00085. ESTs gb|T42351, gb|AA0424...
375.0 [0..16] [496..16]

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Predicted Domain #1
Region A:
Residues: [1-502]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLIHLFLLL GLLSLEAAAS FSPGSRSILR DIGSNVADQK DNAIELNATN FDSVFQDSPA  60
   61 KYAVLEFFAH WCPACRNYKP HYEKVARLFN GADAVYPGVV LMTRVDCAIK MNVKLCDKFS 120
  121 INHYPMLFWA PPKRFVGGSW GPKQEKNEIS VVNEWRTADL LLNWINKQIG SSYGLDDQKL 180
  181 GNLLSNISDQ EQISQAIFDI EEATEEAFDI ILAHKAIKSS ETSASFIRFL QLLVAHHPSR 240
  241 RCRTGSAEIL VNFDDICPSG ECSYDQESGA KDSLRNFHIC GKDVPRGYYR FCRGSKNETR 300
  301 GFSCGLWVLM HSLSVRIEDG ESQFAFTAIC DFINNFFMCD DCRRHFHDMC LSVKTPFKKA 360
  361 RDIALWLWST HNKVNERLKK DEDSLGTGDP KFPKMIWPPK QLCPSCYLSS TEKNIDWDHD 420
  421 QVYKFLKKYY GQKLVSVYKK NGESVSKEEV IAAAEEMAVP TNALVVPVGA ALAIALASCA 480
  481 FGALACYWRT QQKNRKQQIQ RR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.69897
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle