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View Structure Prediction Details

Protein: gi|42573770
Organism: Arabidopsis thaliana
Length: 241 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42573770.

Description E-value Query
Range
Subject
Range
gi|50750722 - gi|50750722|ref|XP_422113.1| PREDICTED: similar to hypothetical protein FLJ40597 [Gallus gallus]
198.0 [0..18] [228..1576]

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Predicted Domain #1
Region A:
Residues: [1-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYVRTQVEA VFDDSEQDGS TISESGSCDS SSDRSFADEL GLMELLEGDK AHDLIYRNCK  60
   61 SGLGDQCQIL SVLRNGFRNV GSRAKLKTFQ VFQEAVQMKH GGDGGAKVKY GWCSVSKHEL 120
  121 KTIFEYGFSE PLRNDGSFGR GLYLSPDNSP LDCLKDSASE SEDGMRFLLL CRVLLGKSEI 180
  181 VPQGSTRSCP SSPEFDSGVD DLVSTKKYIV WSTHMNTHVL PEFLVCIKAP FNLTRKQNQN 240
  241 L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.30103
Match: 1a26A
Description: THE CATALYTIC FRAGMENT OF POLY(ADP-RIBOSE) POLYMERASE COMPLEXED WITH CARBA-NAD
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle