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View Structure Prediction Details

Protein: gi|15237698
Organism: Arabidopsis thaliana
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15237698.

Description E-value Query
Range
Subject
Range
gi|21105736 - gi|21105736|gb|AAM34767.1|AF509867_1 nam-like protein 4 [Petunia x hybrida]
342.0 [0..10] [389..17]

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Predicted Domain #1
Region A:
Residues: [1-201]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARDSKKAGG ALPAPATAMG NAAAETSLPP GFRFHPSDEE LISYYLKKKV QGKPMRYDEI  60
   61 GEVDICKLEP WDLAVIIFLC FLALDFRYVL KTRDKEWFFF SALDKKTRTG TSMSRATKQG 120
  121 YWKVTGTDGK IRQGGDGKVT IGTMKTLVFH RGRSPNGLGT DWVMNEYHLA KNDEGVPQNN 180
  181 TGSRYAPFLE EEWDDDNGER V

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.154902
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [202-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AIHVPDDGPL PLCVLNKEAP LPLIQYKRKR RISSSQTTQD HRSFTETIID STASAEPLDI  60
   61 SERIALRALN GMLDDLEKEQ EPVVVDGNKI NEIQQESQLQ RKKLIDLNLK EDAPSPLCVV 120
  121 NKETPSPLKY MIDDLEKEQE PATKRINDLV LKENDEIVVF REMQERESMK AEMEISFLEA 180
  181 QIDALDRKID HPHK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.15
Match: 2i1jA
Description: No description for 2i1jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle