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View Structure Prediction Details

Protein: PPA27_ARATH
Organism: Arabidopsis thaliana
Length: 611 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPA27_ARATH.

Description E-value Query
Range
Subject
Range
gi|18075958 - gi|18075958|emb|CAD12836.1| diphosphonucleotide phosphatase 1 [Lupinus luteus]
535.0 [0..7] [611..10]
gi|77556254, gi|... - gi|77556254|gb|ABA99050.1| diphosphonucleotide phosphatase 1, putative, expressed [Oryza sativa (jap...
531.0 [0..5] [611..4]
PPA1_ARATH - Probable inactive purple acid phosphatase 1 OS=Arabidopsis thaliana GN=PAP1 PE=2 SV=1
529.0 [0..1] [611..1]

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Predicted Domain #1
Region A:
Residues: [1-69]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARNFLLVLL WFIVQVSSSH ENGRGDQALS QIDIYAINLA QHHSAFIHVS PLVLGSQGQD  60
   61 TEWVNVVIS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [70-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPEPSSDDWV GVFSPAKFDS SSCAPTDDKE IAPFICSAPV KYMYAKSSPD YMKTGNAVLK  60
   61 FMLINQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [136-611]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RADFSFALFT GGLSNPTLVS VSNHVSFINP KAPVYPRLAL GKKWDEMTVT WTSGYNIGEA  60
   61 VPFVEWSRKG TRSRRSPAGT LTFTRNSMCG APARTVGWRD PGFIHTASLK DLWPNLKYTY 120
  121 RMGHELMNGS IVWSKNFTFK SSPYPGQDSL QRVIIFGDMG KGERDGSNEY NDYQPGSLNT 180
  181 TDQLIKDLKN IDIVFHIGDI TYANGYISQW DQFTAQVEPI ASTVPYMVAS GNHERDWPDS 240
  241 GSFYGGKDSG GECGVPAETM FDFPAENKAK FWYSADYGMF RFCVADTEHD WREGSEQYQF 300
  301 IERCLASVDR RAQPWLIFIA HRVLGYSTND WYGQEGSFEE PMGRESLQKL WQKYKVDIAF 360
  361 YGHVHNYERT CPIYQNQCMD NEKSHYSGAF KGTIHVVVGG AGSHLSSFSS LKPKWSIFRD 420
  421 YDYGFVKLTA FDHSSLLFEY KKSSNGAVHD SFTIFREYRD VLACVRDSCE PTTLAS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.154902
Match: 1kbpA
Description: Purple acid phosphatase, N-terminal domain; Plant purple acid phosphatase, catalytic domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle