YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FRO7_ARATH
Organism: Arabidopsis thaliana
Length: 747 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRO7_ARATH.

Description E-value Query
Range
Subject
Range
gi|8978271 - gi|8978271|dbj|BAA98162.1| FRO1-like protein; NADPH oxidase-like [Arabidopsis thaliana]
566.0 [0..1] [747..1]

Back

Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDHETPLLS KDLSSSSSSS SSSSSVVVSS LKWILKVVMS VIFVTWVVFL MMYPGSLGDQ  60
   61 ILTNWRAISS NTLFGLTGSM FLIFSGPILV IAILASLYLI ISGEETVFTK KKITKFPRFR 120
  121 LWTFPVLVDG PFGV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [135-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSAAEFLGIM VFSVFFLWAI YAYTLRNLNV LDYFHVLPNN RSIFLLELTG LRFGMIGLLC  60
   61 MVFLFLPISR GSILLRLIDI PFEHATRYHV WLGHITMTFF SLHGLCYVVG WTIQGQLLEL 120
  121 LFEWKATGIA VLPGVISLVA GLLMWVTSL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 5.167491
Match: PF01794.10
Description: No description for PF01794.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [284-606]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HTVRKNYFEL FFYTHQLYIV FVVFLALHVG DYLFSIVAGG IFLFILDRFL RFYQSRRTVD  60
   61 VISAKSLPCG TLELVLSKPP NMRYNALSFI FLQVKELSWL QWHPFSVSSS PLDGNHHVAV 120
  121 LIKVLGGWTA KLRDQLSTLY EAENQDQLIS PESYPKITTC VEGPYGHESP YHLAYENLVL 180
  181 VAGGIGITPF FAILSDILHR KRDGKDCLPG KVLVVWAIKN SDELSLLSAI DIPSICHFFS 240
  241 KKLNLEIHIY VTRQSEPCLE DGMVHKVVHP SVKTPWTNGC SMSVLVGTGD NIWSGLYLII 300
  301 STIGFIAMIT LVDIFYINKY NIT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.69897
Match: 1cqxA
Description: Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.52421953607929 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [607-747]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TWWYKGLLFV VCMVASVLIF GGLVVVFWHR WEHKTGEVEA NGNDKVDLNG EETHNPSAAE  60
   61 LKGLAIEEDV QNYTTIRYGT RPAFREIFES LNGKWGSVDV GVIVCGPATL QTTVAKEIRS 120
  121 HSIWRSANHP LFHFNSHSFD L

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.1
Match: 2ok7A
Description: No description for 2ok7A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle