YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ANM14_ARATH
Organism: Arabidopsis thaliana
Length: 528 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ANM14_ARATH.

Description E-value Query
Range
Subject
Range
gi|42573634 - gi|42573634|ref|NP_974913.1| PRMT4A (PROTEIN ARGININE METHYLTRANSFERASE 4A); [myelin basic protein]-...
454.0 [0..1] [528..1]

Back

Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIPSLNKQQ EFTLASVTDL TSPSSSLSSS PVVATFSCVN EVKELRFQES KSSDGFSFDL  60
   61 SSTQLFKLGP LQFTCVSDGS ISSAKEKSSF SRGVVIKFRD EKDSKEFCDS FEECKKDDAV 120
  121 KQGSALPNGT VVSANKSKFD DKIEAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.39794
Match: 2as0A
Description: Crystal Structure of PH1915 (APC 5817): A Hypothetical RNA Methyltransferase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [147-528]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAKMYFHYYG QLLHQQNMLQ DYVRTGTYHA AVMENRSDFS GRVVVDVGAG SGILSMFAAL  60
   61 AGAKHVYAVE ASEMAEYARK LIAGNPLLAE RITVIKGKIE DIELPEKADV LISEPMGTLL 120
  121 VNERMLETYV IARDRFLSPN GKMFPTVGRI HMAPFADEFL FVEMANKALF WQQQNYYGVD 180
  181 LTPLYVSAHQ GYFSQPVVDA FDPRLLVAPS MFHVIDFTMM TEEQFYEIDI PLKFTASVCT 240
  241 RIHGLACWFD VLFDGSTVQR WFTTAPGAPT THWYQIRCVL SQPIHVMAGQ EITGRLHLIA 300
  301 HSAQSYTINL TLSAKMWGPG ANQGGILQTS SCKLDLKEPY YRMSQPQVYP TQEPPAQSQD 360
  361 IHIHSDDLEE LELLQQNANA QL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.69897
Match: 2v74B
Description: No description for 2v74B was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle