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View Structure Prediction Details

Protein: gi|15240324
Organism: Arabidopsis thaliana
Length: 207 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240324.

Description E-value Query
Range
Subject
Range
gi|114631140 - gi|114631140|ref|XP_508164.2| PREDICTED: DnaJ (Hsp40) homolog, subfamily B, member 12 isoform 2 [Pan...
140.0 [0..3] [206..9]

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Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKTCLINFT SALTSSEDHG RRHIAPLIGV DGIFLKCTLK VENEKKWLWF IQMVKSDFDL  60
   61 KDRDGFIITS DRPKLFPMEI AERKLSENDY NGAKKFINKA Q

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.522879
Match: 2c2lA
Description: Crystal structure of the CHIP U-box E3 ubiquitin ligase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [102-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLYPKLDGLK TSVDDDQLKK QYKKLALLLH PDKYNLNGAE GAFKPVTEAW CMLSDKVKRT  60
   61 SYDQRRISKE AKTEIQKQPN PQNIGARSNK LASWIKKQLN PTIYTS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.0
Match: 1xblA
Description: NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
Matching Structure (courtesy of the PDB):

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