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View Structure Prediction Details

Protein: gi|22327215
Organism: Arabidopsis thaliana
Length: 433 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22327215.

Description E-value Query
Range
Subject
Range
gi|90265045 - gi|90265045|emb|CAH67641.1| H0102C09.2 [Oryza sativa (indica cultivar-group)]
246.0 [0..5] [421..63]

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Predicted Domain #1
Region A:
Residues: [1-433]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPPAPTYVG SDVTPSLKRN SNGIGWEYEI VCNPKNPDRI KCKLCLKEMS GGVYRIKEHI  60
   61 AHLPGNVVAC PKSLKMNKFA TYIHPEARVG TQIRQQNINI VQDGCIVQDG CINKEEQERP 120
  121 KVLLKTQKAG WKQNGVMTDA WSDMKRRSIM NLCVNSKGGK CFLSSKDAST NSHTGLYIFE 180
  181 YVDRCIADVG AKNVVQVVTD NALNNVTAAK MLKEKRPNIF WTGCVAHTVD LMLEAISKLP 240
  241 KMGKMQTFGD YKGENLFLNR YESCVLEWCD VCVEDFGPLM KLLRLADGEN KPFVGFIFGE 300
  301 LLEVRNKITI ACNNLERNYK PIFDIIDEKM KGRLDSWNWW SLYGCHVPTL QRLAIKILSL 360
  361 TPSSSSFERN WSAFEGPSER DEEPNGEPVY QTPNEKPRED LESHEEHDIT IDIEFESDNE 420
  421 QVVNVDVIRG QEV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.39794
Match: 2bw3A
Description: Three-dimensional structure of the Hermes DNA transposase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle