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View Structure Prediction Details

Protein: ATL31_ARATH
Organism: Arabidopsis thaliana
Length: 368 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATL31_ARATH.

Description E-value Query
Range
Subject
Range
gi|21536625 - gi|21536625|gb|AAM60957.1| RING-H2 zinc finger protein-like [Arabidopsis thaliana]
267.0 [0..1] [368..1]

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Predicted Domain #1
Region A:
Residues: [1-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG  60
   61 FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET IETFPTFVY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [110-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEVKTQKIGK GALECAICLN EFEDDETLRL LPKCDHVFHP HCIGAWLQGH VTCPVCRTNL  60
   61 AEQTPEPEVV VETDLEAQQQ SAVPVPVVEL PRVKFPRSHT TGHSVVLPGE STDRFTLRVP 120
  121 EELRKKIM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.522879
Match: 2cklB
Description: No description for 2cklB was found.

Predicted Domain #3
Region A:
Residues: [238-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANWKLNRSNS VFVLPRGGSS RSGKQVDRSR AKSDRWLFRK TPSFLWRNRD DGSIRLGGTG  60
   61 SVRGNSVTSP SGDSVRADRW AFLRNPSFLW RNTTPVPSPR VEVNNKDGEG TSSVQHIGTV 120
  121 GSTSGSLRLP V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle