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View Structure Prediction Details

Protein: gi|15238745
Organism: Arabidopsis thaliana
Length: 973 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|15238745.

Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGSLYGECG NYIGPEIESD RDSDDSVEDE DLQEPGGSNG WITTINENQN IVLPEDKKYY  60
   61 PIAKEVYGED VETLVMDEDE QSLEQPIIKP VRDIRFEVGV IKDQTTTYVS TLFLIGLMS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.39794
Match: 2hjgA
Description: No description for 2hjgA was found.

Predicted Domain #2
Region A:
Residues: [120-973]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPALVRNVAL VGHLQHGKTV FMDMLVEQTH RMSTFNAEND KHMRYTDTRV DEQERNISIK  60
   61 AVPMSLVLED SRSKSYLCNI MDTPGNVNFS DEMTASLRLA DGAVFIVDAA QGVMVNTERA 120
  121 IRHAIQDHLP IVVVINKVDR LITELKLPPR DAYYKLRYTI EVINNHISAA STNAADLPLI 180
  181 DPAAGNVCFA SGTAGWSFTL QSFARMYAKL HGVAMDVDKF ASRLWGDVYY HPDTRVFNTS 240
  241 PPVGGGERAF VQFILEPLYK IYSQVIGEHK KSVETTLAEL GVTLSNSAYK LNVRPLLRLA 300
  301 CSSVFGSASG FTDMLVKHIP SPREAAARKV DHSYTGTKDS PIYESMVECD PSGPLMVNVT 360
  361 KLYPKSDTSV FDVFGRVYSG RLQTGQSVRV LGEGYSPEDE EDMTIKEVTK LWIYQARYRI 420
  421 PVSSAPPGSW VLIEGVDASI MKTATLCNAS YDEDVYIFRA LKFNTLPVVK TATEPLNPSE 480
  481 LPKMVEGLRK ISKSYPLAIT KVEESGEHTI LGTGELYLDS IIKDLRELYS EVQVKVADPV 540
  541 VSFCETVVES SSMKCFAETP NKKNKLTMIA EPLDRGLAED IENGVVSIDW NRVQLGDFFR 600
  601 TKYDWDLLAA RSIWAFGPDK QGTNILLDDT LPTEVDRNLM MGVKDSIVQG FQWGAREGPL 660
  661 CDEPIRNVKF KIVDARIAPE PLHRGSGQMI PTARRVAYSA FLMATPRLME PVYYVEIQTP 720
  721 IDCVTAIYTV LSRRRGYVTS DVPQPGTPAY IVKAFLPVIE SFGFETDLRY HTQGQAFCLS 780
  781 VFDHWAIVPG DPLDKAIQLR PLEPAPIQHL AREFMVKTRR RKGMSEDVSG NKFFDEAMMV 840
  841 ELAQQTGDLH LQMI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1n0uA
Description: Elongation factor 2 (eEF-2), domain II; Elongation factor 2 (eEF-2), N-terminal (G) domain; Elongation factor 2 (eEF-2), domain IV; Elongation factor 2 (eEF-2)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle