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View Structure Prediction Details

Protein: HMA8_ARATH
Organism: Arabidopsis thaliana
Length: 883 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for HMA8_ARATH.

Predicted Domain #1
Region A:
Residues: [1-143]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNLLRFPL PPPSSLHIRP SKFLVNRCFP RLRRSRIRRH CSRPFFLVSN SVEISTQSFE  60
   61 STESSIESVK SITSDTPILL DVSGMMCGGC VARVKSVLMS DDRVASAVVN MLTETAAVKF 120
  121 KPEVEVTADT AESLAKRLTE SGF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.69897
Match: 2rmlA
Description: No description for 2rmlA was found.

Predicted Domain #2
Region A:
Residues: [144-883]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EAKRRVSGMG VAENVKKWKE MVSKKEDLLV KSRNRVAFAW TLVALCCGSH TSHILHSLGI  60
   61 HIAHGGIWDL LHNSYVKGGL AVGALLGPGR ELLFDGIKAF GKRSPNMNSL VGLGSMAAFS 120
  121 ISLISLVNPE LEWDASFFDE PVMLLGFVLL GRSLEERAKL QASTDMNELL SLISTQSRLV 180
  181 ITSSDNNTPV DSVLSSDSIC INVSVDDIRV GDSLLVLPGE TFPVDGSVLA GRSVVDESML 240
  241 TGESLPVFKE EGCSVSAGTI NWDGPLRIKA SSTGSNSTIS KIVRMVEDAQ GNAAPVQRLA 300
  301 DAIAGPFVYT IMSLSAMTFA FWYYVGSHIF PDVLLNDIAG PDGDALALSL KLAVDVLVVS 360
  361 CPCALGLATP TAILIGTSLG AKRGYLIRGG DVLERLASID CVALDKTGTL TEGRPVVSGV 420
  421 ASLGYEEQEV LKMAAAVEKT ATHPIAKAIV NEAESLNLKT PETRGQLTEP GFGTLAEIDG 480
  481 RFVAVGSLEW VSDRFLKKND SSDMVKLESL LDHKLSNTSS TSRYSKTVVY VGREGEGIIG 540
  541 AIAISDCLRQ DAEFTVARLQ EKGIKTVLLS GDREGAVATV AKNVGIKSES TNYSLSPEKK 600
  601 FEFISNLQSS GHRVAMVGDG INDAPSLAQA DVGIALKIEA QENAASNAAS VILVRNKLSH 660
  661 VVDALSLAQA TMSKVYQNLA WAIAYNVISI PIAAGVLLPQ YDFAMTPSLS GGLMALSSIF 720
  721 VVSNSLLLQL HKSETSKNSL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 113.0
Match: 3b8eA
Description: No description for 3b8eA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle