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View Structure Prediction Details

Protein: gi|42573279
Organism: Arabidopsis thaliana
Length: 527 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42573279.

Description E-value Query
Range
Subject
Range
EGY2_ARATH - Probable zinc metalloprotease EGY2, chloroplastic OS=Arabidopsis thaliana GN=EGY2 PE=2 SV=1
475.0 [0..1] [527..1]

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Predicted Domain #1
Region A:
Residues: [1-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLAVASFRG NFGVLSQCSS CCSLQFQPFV AATSSLNFGQ TGTSRRKKDL KLERVFRKRE  60
   61 TLVRVTETQT EPEGNDDEDN KEGKESSADD PPTKIPTELN SQSTVVNEAP GNEEENKAQF 120
  121 SSQDGDKLEV SSGSPLPGVN PLQLDDSMRL PKETIDILRG QVFGFDTFFV TSQEPYEGGV 180
  181 LFKGNLRGKP ATSYEKIKTR MENNFGDQYK LFLLTNPEDD KPVAVVVPRR SLEPETTAVP 240
  241 EWFAAGSFGL VALFTLFLRN VP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.33
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #2
Region A:
Residues: [263-527]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALQSDLLSAF DNLELLKDGL PGALVTALVL GVHELGHILV ANSLGIKLGV PFFVPSWQIG  60
   61 SFGAITRIKN IVAKREDLLK VAAAGPLAGF SLGLILFLIG LFVPPSDGIG VVVDASVFHE 120
  121 SFLAGGIAKL LLGDALKEGT SISLNPLVIW AWAGLLINGI NSIPAGELDG GKIAFSIWGR 180
  181 KTATRLTGAS IALLGLSALF SDVAFYWVVL IFFLQRGPIA PLAEEITVPD DKYVSLGILV 240
  241 LFLSLLVCLP YPFAFTGNEA MMIGL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 19.036212
Match: PF02163.13
Description: No description for PF02163.13 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle