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View Structure Prediction Details

Protein: RH58_ARATH
Organism: Arabidopsis thaliana
Length: 472 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RH58_ARATH.

Description E-value Query
Range
Subject
Range
DBP2_SCHPO - ATP-dependent RNA helicase dbp2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dbp2 PE=2 ...
dbp2 - ATP-dependent RNA helicase Dbp2
330.0 [0..5] [471..61]

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Predicted Domain #1
Region A:
Residues: [1-472]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQLLNVPH LAFFPKISYA SVFSTLKPSF FHSTSTRRAL KSSPSSRIIN LQAVAETSSE  60
   61 IESNSVTETT VPLTLRQICQ GFVPEHILHR MEEIGFVFPT DIQREALPTL FTGRDCILHA 120
  121 QTGSGKTLTY LLLIFSLINP QRSSVQAVIV VPTRELGMQV TKVARMLAAK SEIDVKGCTV 180
  181 MALLDGGTLR RHKSWLKAEP PAILVATVAS LCHMLEKHIF RIDSVRVLVV DEVDFLFYSS 240
  241 KQVGSVRKLL TSFSSCDKRQ TVFASASIPQ HKHFVHDCIQ QKWTKRDVVH VHVSAIMPMP 300
  301 LCLLHRFVMC EKTNKHQVLL ALLESDAPES AIIFVGEQSE KSKKAGNDPS TTLLMEFLKT 360
  361 SYKGSLEILL LEGDMNFNSR AASLTEIRQG GGFLLVSTDI AARGIDLPET THIFNFDLPQ 420
  421 TVTDYLHRAG RAGRKPFSDR KCIVANLITS EERFVLQRYE NELMFSCEEM ML

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.39794
Match: 2db3A
Description: No description for 2db3A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle