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View Structure Prediction Details

Protein: RVE4_ARATH
Organism: Arabidopsis thaliana
Length: 293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RVE4_ARATH.

Description E-value Query
Range
Subject
Range
gi|20148387, gi|... - gi|20148387|gb|AAM10084.1| putative protein [Arabidopsis thaliana], gi|14596213|gb|AAK68834.1| putat...
219.0 [0..1] [293..1]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSTNPVVAE VIPAETSTDA TETTIATTEA GEAPEKKVRK AYTITKSRES WTEGEHDKFL  60
   61 EALQLFDRDW KKIEDFVGSK TVIQIRSHAQ KYFLKVQKNG TLAHVPPPRP KRKAAHPYPQ 120
  121 KASKNAQMSL HVSMSFPTQI NNLPGYTP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.0
Match: 2v1dB
Description: No description for 2v1dB was found.

Predicted Domain #2
Region A:
Residues: [149-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WDDDTSALLN IAVSGVIPPE DELDTLCGAE VDVGSNDMIS ETSPSASGIG SSSRTLSDSK  60
   61 GLRLAKQAPS MHGLPDFAEV YNFIGSVFDP DSKGRMKKLK EMDPINFETV LLLMRNLTVN 120
  121 LSNPDFEPTS EYVDAAEEGH EHLSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle