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View Structure Prediction Details

Protein: gi|42573071
Organism: Arabidopsis thaliana
Length: 403 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42573071.

Description E-value Query
Range
Subject
Range
gi|18417250, gi|... - gi|21928053|gb|AAM78055.1| At4g29227 [Arabidopsis thaliana], gi|18417250|ref|NP_567816.1| pfkB-type ...
257.0 [0..1] [403..1]

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Predicted Domain #1
Region A:
Residues: [1-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCFTHVPPL PLFSTSGIYL PASRRFTSFR IRMSSSSSID SVPPPPDNAI VLGCGGIAVD  60
   61 FLATVDSYPQ ADDKIRSTSL KVQGGGNAAN ALTCAARLGL NSRLISKVAN DSQGKGMLEE 120
  121 LEADGVDTSF IVVSKEGNSP FTYILVDNQT KTRTCIHTPG DPPMLPTDLS QSSMLSALDR 180
  181 ASIVYFDVRL HETALVIAKE ASRKKIPILV DTEKKRDGLD DLLPFADYVV CPENFPQTWT 240
  241 EVSSTPGALV SMLLRLPKLK FVIVTSGEHG CLMVQRASKE VFESQETDIE SLLETLKHRK 300
  301 DSTTTFPTCV SSETTKLKAN GVGTMTGRLF LGTAEKIPPE ELVDTTGAGD AFIGAVLYAI 360
  361 CAGMPPEKML PFAAQVAGCS CRALGARTGL PHRTDPRLVP FLV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.154902
Match: 2qcvA
Description: No description for 2qcvA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle