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View Structure Prediction Details

Protein: CRK11_ARATH
Organism: Arabidopsis thaliana
Length: 667 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRK11_ARATH.

Description E-value Query
Range
Subject
Range
gi|4127461 - gi|4127461|emb|CAA09731.1| receptor-like protein kinase, RLK3 [Arabidopsis thaliana]
557.0 [0..1] [659..1]

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Predicted Domain #1
Region A:
Residues: [1-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQRSLFSVL CFFFISFGVA SVSAQTCTTD KGTFRPNGTY DVNRRLILSS LPSNVTDQDG  60
   61 LYYNGSIGQQ PNRVYAIGMC IPGSTSEDCS DCIKKESEFF LKNCPNQTEA YSWPGEPTLC 120
  121 YVRYSNTSFS GSADLNPRNW LTNTGDLDSN LTEFTKIWEG LMGRMISAAS TAKSTPSSSD 180
  181 NHYSADSAVL TPLLNIYALM QCTPDLSSGD CENCLRQSAI DYQSCCSQKR GGVVMRPSCF 240
  241 LRWDLYTYSN AFDNLTVASP PPEPPVTVPQ PAGDQDNPTN NDSKGISAGV VVAITVPTVI 300
  301 AILILLVLGF VLFRRRKSYQ RTK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.045757
Match: 1fx5A
Description: Legume lectin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [324-667]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TESESDISTT DSLVYDFKTI EAATNKFSTS NKLGEGGFGA VYKGKLSNGT DVAVKRLSKK  60
   61 SGQGTREFRN EAVLVTKLQH RNLVRLLGFC LEREEQILIY EFVHNKSLDY FLFDPEKQSQ 120
  121 LDWTRRYKII GGIARGILYL HQDSRLKIIH RDLKASNILL DADMNPKIAD FGLATIFGVE 180
  181 QTQGNTNRIA GTYAYMSPEY AMHGQYSMKS DIYSFGVLVL EIISGKKNSG VYQMDETSTA 240
  241 GNLVTYASRL WRNKSPLELV DPTFGRNYQS NEVTRCIHIA LLCVQENPED RPMLSTIILM 300
  301 LTSNTITLPV PRLPGFFPRS RQLKLVSEGS ESDQYTSKSS SFSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.522879
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle