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View Structure Prediction Details

Protein: gi|105830019, gi...
Organism: Arabidopsis thaliana
Length: 226 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|105830019, gi....

Description E-value Query
Range
Subject
Range
gi|21537393 - gi|21537393|gb|AAM61734.1| unknown [Arabidopsis thaliana]
218.0 [0..1] [226..1]

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Predicted Domain #1
Region A:
Residues: [1-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEEAENLRA AFGDSSDDED IADRPGKETI GIGDSAVWER VEEINGLWLY RNFLSIAHQS  60
   61 HLLSAILNEG WFVEESINQA MRFGDLPSWA TELSDLIRET LESVDLPVLS ADLLWREPLF 120
  121 DQLIVNLYQP GEGICAHVDL LRFEDGIAIV SLESPCVMRF SPAEKNEYEA VDVLLNPGSL 180
  181 ILMSGEARYR WKHEINRKQN GFQLWEGEEI DQKRRISITL RKLCQA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.39794
Match: 2fd8A
Description: Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate, and methylated trinucleotide T-meA-T
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.391261742890951 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle