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View Structure Prediction Details

Protein: gi|18415698
Organism: Arabidopsis thaliana
Length: 415 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18415698.

Description E-value Query
Range
Subject
Range
gi|186512105, gi... - gi|51968370|dbj|BAD42877.1| putative protein [Arabidopsis thaliana], gi|186512105|ref|NP_567628.2| u...
669.0 [0..1] [415..1]

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Predicted Domain #1
Region A:
Residues: [1-415]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGALFRNAS LCARRIILSS RISPNVPFLT PIAAPAPPKF RFFSSESGEN STTATESSPT  60
   61 DSSDKKDLVV KDVSNKELKS RIDKSFNEGN EDALPGVIEA LLQRRLVDKH AETDDELMEK 120
  121 IESLPFKDDV KDEDFESDFE EAHSTDEELE DLYNSPEYVA EKMRKKEFFN MDDNKWDHMI 180
  181 REGIQHGCLT DTKQCEEILE DMLKWDQLLP DDLKKKVEAK FNELGDMCER GEIEAEAAYE 240
  241 LFKEFEDEMV IQYGDQMEAE GPPQFGETDT SDRNTDLDDP SGKGPILRWQ SRIVFAPGGD 300
  301 AWHPKNRKVK MSVTVKELGL SNHQAKRLRE LVGKRYHSGK DELTITCERF EHREENRKDC 360
  361 LRTLYGLIEE AGKANKIAED IRTSYVKQRL RASPAFMQKL QAKIIRSKES NAINA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.06
Match: 1ml5Z
Description: 70S ribosome functional complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle