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View Structure Prediction Details

Protein: gi|22328358
Organism: Arabidopsis thaliana
Length: 158 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22328358.

Description E-value Query
Range
Subject
Range
gi|118344558, gi... - gi|55771082|dbj|BAD69801.1| cathepsin D1 [Takifugu rubripes], gi|118344558|ref|NP_001072052.1| cathe...
147.0 [0..2] [153..252]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYGHYHVDL EMISVNGITI PNHLTPIKGN TIIDTWTTIL NSAGESYGEL KSHIDNFIDE  60
   61 KLNNFSDGQL ECYNGTVQRE LASLPTVTLT FYKGVSLDLD LTSLFQQIEE EYFCLAVMMT 120
  121 PGINLNIIWT TVFQMYNIGF DLEDETIYFE KISCDLLY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.0
Match: 2psgA
Description: REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle