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View Structure Prediction Details

Protein: OP162_ARATH
Organism: Arabidopsis thaliana
Length: 178 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OP162_ARATH.

Description E-value Query
Range
Subject
Range
gi|18414605, gi|... - gi|21593908|gb|AAM65873.1| pore protein homolog [Arabidopsis thaliana], gi|18414605|ref|NP_567488.1|...
284.0 [0..1] [178..1]

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Predicted Domain #1
Region A:
Residues: [1-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKSGGRIVM DEIRSFEKAH LFDLGHPLLN RIADSFVKAA GVGALQAVSR EAYFTVVDGA  60
   61 GFDSNNVGPP SEITGNKKHR FPNLRGESSK SLDALVKNTG KESLQWGLAA GLYSGITYGM 120
  121 TEVRGGAHDW RNSAVAGALT GAAMAMTTSE RTSHEQVVQS ALTGAAISTA ANLLSSVF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 41.356547
Match: PF02466.10
Description: No description for PF02466.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle