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View Structure Prediction Details

Protein: gi|110738565, gi...
Organism: Arabidopsis thaliana
Length: 90 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110738565, gi....

Description E-value Query
Range
Subject
Range
gi|68397830 - gi|68397830|ref|XP_690611.1| PREDICTED: similar to Polr1a protein [Danio rerio]
93.0 [0..2] [86..195]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLEKWLAL LYPRVQGGEG REEECCSVCL MRMEAKDVIK SLPCSHEFHS LCVDTWFNVS  60
   61 RKICCPLCRF SPTTILLTDE LLLWFSSFHF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.0
Match: 1x4jA
Description: Solution structure of RING finger in RING finger protein 38
Matching Structure (courtesy of the PDB):

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Created and Maintained by: Michael Riffle