YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SUVR4_ARATH
Organism: Arabidopsis thaliana
Length: 492 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUVR4_ARATH.

Description E-value Query
Range
Subject
Range
gi|17066863 - gi|17066863|gb|AAL01113.2|AF408062_1 Su(VAR)3-9-related protein 4 [Arabidopsis thaliana]
418.0 [0..1] [483..1]

Back

Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN  60
   61 WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGNRGKNLKV ID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPATLKKTYE TRSASSGSSI QVVQKQPQLS NGDRKRKYKS RIADITKGSE SVKIPLVDDV  60
   61 GSEAVPKFTY IPHNIVYQSA YLHVSLARIS DEDCCANCKG NCLSADFPCT CARETSGEYA 120
  121 YTKEGLLKEK FLDTCLKMKK EPDSFPKVYC KDCPLERDHD KGTYGKCDGH LIRKFIKECW 180
  181 RKCGCDMQCG NRVVQRGIRC QLQVYFTQEG KGWGLRTLQD LPKGTFICEY IGEILTNTEL 240
  241 YDRNVRSSSE RHTYPVTLDA DWGSEKDLKD EEALCLDATI CGNVARFINH RCEDANMIDI 300
  301 PIEIETPDRH YYHIAFFTLR DVKAMDELTW DYMIDFNDKS HPVKAFRCCC GSESCRDRKI 360
  361 KGSQGKSIER RKIVSAKKQQ GSKEVSKKRK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.522879
Match: 2igqA
Description: No description for 2igqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle