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View Structure Prediction Details

Protein: LPAT2_ARATH
Organism: Arabidopsis thaliana
Length: 389 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LPAT2_ARATH.

Description E-value Query
Range
Subject
Range
LPAT2_ARATH - 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=LPAT2 PE=1 SV=1
378.0 [0..1] [389..1]

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Predicted Domain #1
Region A:
Residues: [1-288]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIAAAVIVP LGLLFFISGL AVNLFQAVCY VLIRPLSKNT YRKINRVVAE TLWLELVWIV  60
   61 DWWAGVKIQV FADNETFNRM GKEHALVVCN HRSDIDWLVG WILAQRSGCL GSALAVMKKS 120
  121 SKFLPVIGWS MWFSEYLFLE RNWAKDESTL KSGLQRLSDF PRPFWLALFV EGTRFTEAKL 180
  181 KAAQEYAASS ELPIPRNVLI PRTKGFVSAV SNMRSFVPAI YDMTVTIPKT SPPPTMLRLF 240
  241 KGQPSVVHVH IKCHSMKDLP ESDDAIAQWC RDQFVAKDAL LDKHIAAD

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.22
Match: 1k30A
Description: Glycerol-3-phosphate (1)-acyltransferase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [289-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TFPGQQEQNI GRPIKSLAVV LSWACVLTLG AIKFLHWAQL FSSWKGITIS ALGLGIITLC  60
   61 MQILIRSSQS ERSTPAKVVP AKPKDNHHPE SSSQTETEKE K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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