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View Structure Prediction Details

Protein: CM1_ARATH
Organism: Arabidopsis thaliana
Length: 340 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CM1_ARATH.

Description E-value Query
Range
Subject
Range
CHMU_ARATH - Chorismate mutase, chloroplastic OS=Arabidopsis thaliana GN=CM1 PE=2 SV=2
591.0 [0..7] [340..1]
gi|76782202 - gi|76782202|gb|ABA54871.1| putative chorismate mutase [Fagus sylvatica]
495.0 [0..1] [340..1]
gi|215697202, gi... - gi|57899563|dbj|BAD87142.1| putative chorismate mutase precursor [Oryza sativa Japonica Group], gi|2...
441.0 [0..54] [340..35]
gi|47846873 - gi|47846873|dbj|BAD21145.1| chorismate mutase [Rosellinia sp. PF1022]
424.0 [0..75] [340..3]
gi|115399572, gi... - gi|115399572|ref|XP_001215375.1| hypothetical protein ATEG_06197 [Aspergillus terreus NIH2624], gi|1...
424.0 [0..75] [339..3]
gi|169779369 - gi|169779369|ref|XP_001824149.1| hypothetical protein [Aspergillus oryzae RIB40]
gi|83772888 - gi|83772888|dbj|BAE63016.1| unnamed protein product [Aspergillus oryzae]
gi|238500013, gi... - gi|238500013|ref|XP_002381241.1| chorismate mutase [Aspergillus flavus NRRL3357], gi|220692994|gb|EE...
420.0 [0..75] [339..3]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEASLLMRSS CCSSAIGGFF DHRRELSTST PISTLLPLPS TKSSFSVRCS LPQPSKPRSG  60
   61 TSSVHAVMTL AGSLTGKKRV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DESESLTLEG IRNSLIRQED SIIFGLLERA KYCYNADTYD PTAFDMDGFN GSLVEYMVKG  60
   61 TEKLHAKVGR FKSPDEHPFF PDDLPEPMLP PLQYPKVLHF AADSININKK IWNMYFRDLV 120
  121 PRLVKKGDDG NYGSTAVCDA ICLQCLSKRI HYGKFVAEAK FQASPEAYES AIKAQDKDAL 180
  181 MDMLTFPTVE DAIKKRVEMK TRTYGQEVKV GMEEKEEEEE EGNESHVYKI SPILVGDLYG 240
  241 DWIMPLTKEV QVEYLLRRLD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 111.0
Match: 2csmA
Description: Allosteric chorismate mutase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle